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Meta Analysis
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metaDE R and RRA R
microarray
meta analysis
4.6 years ago
lily
▴ 20
0
votes
1
reply
666
views
Meta_analysis of microarray data
microarray
microarray data
Meta Analysis
platform
updated 5.6 years ago by
James W. MacDonald
67k • written 5.6 years ago by
Jamal
• 0
0
votes
1
reply
1.3k
views
Meta_analysis of different platforms of microarray data
microarray
meta analysis
cancer
Software
R
updated 5.7 years ago by
James W. MacDonald
67k • written 5.7 years ago by
Jamal
• 0
0
votes
0
replies
683
views
how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA
pvalcombination
meta analysis
metaMA
DEGs' indices
6.4 years ago
niteshkumar20sept
• 0
0
votes
1
reply
871
views
meta de r package
meta analysis
6.8 years ago
lily
▴ 20
1
vote
0
replies
1.2k
views
Meta Analysis on CAMERA results
limma
camera
cohen d
meta analysis
7.6 years ago
Andy91
▴ 60
0
votes
1
reply
1.4k
views
meta analysis of clc output(differential expression data )
rnaseq
metaseq
clc output
pvalue
meta analysis
updated 7.7 years ago by
Koki
▴ 10 • written 7.7 years ago by
hassangiahi
• 0
2
votes
3
replies
1.9k
views
combine different GSE on different GPL
annotation
genesymbols
meta analysis
8.5 years ago
wahaha123
• 0
8 results • Page
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Hi Maria, so what is the code you are using? By the 3rd way to conduct the analysis do you mean looking at the interaction model from part …
Comment: miRTarRnaseq library
by
María Calvo
• 0
Hello, in line with the previous questions, when the miRNA-mRNA interaction analysis is performed (3 rd way to conduct the analysis), I obt…
Answer: heatmap with batch effect
by
James W. MacDonald
67k
You have only one condition in the second batch, so it's not possible to remove the batch effect. You can probably adjust for it somewhat, …
Answer: how do I convert an Ilumn IDREF to a CPG loci
by
James W. MacDonald
67k
``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame with 865859 rows and 3 columns ch…
Answer: Which input data is acceptable for MAST?
by
Andrew_McDavid
▴ 270
Not too familiar with SCT v2. If it also has a point-mass at zero and the non-zero component is roughly-symmetric, then it might work ok w…
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Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
Answer: How to control batch effect if Group and batch are same?
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